Microbiome Research Reports
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Editor-in-Chief: Marco Ventura
Indexing: ESCI, Scopus, PMC, CAS, Lens, ASCI,
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Editor-in-Chief: Marco Ventura
Median time to first editorial decision: 7 days
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Microbiome Research Reports

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

Articles

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A responder-informed gut microbial consortium enhances anti-PD-1 efficacy in a mouse cancer model

Uk Jin Jeong, ...Sang Sun Yoon
Open Access Original Article DOI: 10.20517/mrr.2025.117 8 Feb 2026
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MUC2 shifts the metabolic profiles of commensal bacteria in defined microbial communities

Erin Chard, ...Melinda A. Engevik
Open Access Original Article DOI: 10.20517/mrr.2025.91 20 Jan 2026
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Immunomodulatory properties of dietary polyphenols: a role for combating infections at mucosal surfaces?

Mona Sharma, ...Andrew R. Williams
Open Access Mini Review DOI: 10.20517/mrr.2025.81 9 Dec 2025
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Benchmarking and optimizing microbiome-based bioinformatics workflow for non-invasive detection of intestinal tumors

Yangyang Sun, ...Xiaoquan Su
Open Access Original Article DOI: 10.20517/mrr.2025.75 30 Nov 2025
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Disclosing the effects of pea-derived proteins on the human gut microbiota

Leonardo Mancabelli, ...Marco Ventura
Open Access Original Article DOI: 10.20517/mrr.2025.77 24 Nov 2025
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Past, present, and future of microbiome-based therapies

Pilar ManriquePilar Manrique, ... David Rios-CovianDavid Rios-Covian
Open Access Review DOI: 10.20517/mrr.2023.80 17 Mar 2024
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A host-microbial metabolite interaction gut-on-a-chip model of the adult human intestine demonstrates beneficial effects upon inulin treatment of gut microbiome

Joanne M. DonkersJoanne M. Donkers, ... Evita van de Steeg
Open Access Original Article DOI: 10.20517/mrr.2023.79 21 Feb 2024
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Probiotics, prebiotics, synbiotics and other microbiome-based innovative therapeutics to mitigate obesity and enhance longevity via the gut-brain axis

Jacqueline L. BoyajianJacqueline L. Boyajian, ... Satya PrakashSatya Prakash
Open Access Review DOI: 10.20517/mrr.2024.05 16 May 2024
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Themed Collections
bifidobacteria
gut microbiota
microbiome
probiotics
bacteriophage
phages
antibiotics
microbial
infant gut
microbial ecology
intestinal microbiome
host-microbe interactions
intestinal fungi
microbial ecosystems
metagenomics
microbial DNA sequencing
bifidobacterium
genomic
irritable bowel syndrome
Topic: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
Topic: Exploring the Infant Microbiome: From Birth to Early Growth and Development
Topic: Microbiomes of Arthropods and Their Environments
Volume 4, Issue 4 (in progress)
Volume 4, Issue 3
Volume 4, Issue 2
Volume 4, Issue 1
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Special Issue: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
MRR Holds Its First Online Editorial Board Meeting
Collaborating globally to shape the future of the journal and advance microbiome research
Microbiome Research Reports Announces 2025 Annual Academic Awards
Thanking scholars for their exceptional contributions to Microbiome Research Reports and the global microbiome community
2025 Annual Report of Microbiome Research Reports
Reviewing the Journal's Development and Achievements in 2025
Microbiome Research Reports Scholars Recognized among Highly Cited Researchers 2025
7 Editorial Board Members, 10 Contributing Authors, and 1 Guest Editor Honored for Outstanding Impact in Microbiology and Cross-Field Research
Microbiome Research Reports Receives Its First Impact Factor of 3.8
We are delighted to announce that Microbiome Research Reports (MRR) has received its first official Impact Factor of 3.8, as published in the 2025 edition of Clarivate's Journal Citation Reports (JCR) on June 18.

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

Past, present, and future of microbiome-based therapies
Pilar ManriquePilar Manrique, ... David Rios-CovianDavid Rios-Covian
Open Access | Review | 17 Mar 2024
Views: | Downloads:
Download PDF
A host-microbial metabolite interaction gut-on-a-chip model of the adult human intestine demonstrates beneficial effects upon inulin treatment of gut microbiome
Joanne M. DonkersJoanne M. Donkers, ... Evita van de Steeg
Open Access | Original Article | 21 Feb 2024
Views: | Downloads:
Download PDF
Probiotics, prebiotics, synbiotics and other microbiome-based innovative therapeutics to mitigate obesity and enhance longevity via the gut-brain axis
Jacqueline L. BoyajianJacqueline L. Boyajian, ... Satya PrakashSatya Prakash
Open Access | Review | 16 May 2024
Views: | Downloads:
Download PDF

Coming soon.

Volume 4, Issue 4 (in progress)
Volume 4, Issue 3
Volume 4, Issue 2
Volume 4, Issue 1
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Microbiome Research Reports
ISSN 2771-5965 (Online)
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All published articles are preserved here permanently:

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