Microbiome Research Reports
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Editor-in-Chief: Marco Ventura
Indexing: ESCI, Scopus, PMC, CAS, Lens,
Submission to first decision: 60 days
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Editor-in-Chief: Marco Ventura
Submission to first decision: 60 days
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Microbiome Research Reports

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

Articles

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Microbiome as a predictive biomarker in locally advanced rectal cancer

Núria Mulet Margalef, ... Mireia Obón-Santacana
Open Access Perspective DOI: 10.20517/mrr.2024.85 23 Mar 2025
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Milk matters: seeding gut ecosystems and shaping microbiota rivalries

Laura Noël-Romas, ... Meghan B. Azad
Open Access Research Highlight DOI: 10.20517/mrr.2024.91 12 Mar 2025
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The oncobiome; what, so what, now what?

Munawar Abbas, Mark TangneyMark Tangney
Open Access Review DOI: 10.20517/mrr.2024.89 26 Feb 2025
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Host-dependent alteration of the gut microbiota: the role of luminal microRNAs

Céline CuinatCéline Cuinat, ... Elena M. ComelliElena M. Comelli
Open Access Review DOI: 10.20517/mrr.2024.46 21 Feb 2025
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Advances in engineered bacteria vaccines for enhancing anti-cancer immunity

Wu Liu, ... Tingtao ChenTingtao Chen
Open Access Research Highlight DOI: 10.20517/mrr.2024.75 14 Jan 2025
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In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Julia Isenring, ... Christophe Lacroix
Open Access Review DOI: 10.20517/mrr.2022.15 16 Jan 2023
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Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Anneleen Segers, Willem M. de VosWillem M. de Vos
Open Access Review DOI: 10.20517/mrr.2023.05 12 Mar 2023
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MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Gabriele Andrea LugliGabriele Andrea Lugli, ... Marco Ventura
Open Access Original Article DOI: 10.20517/mrr.2022.21 29 Apr 2023
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Topic: Fermented Foods and Gut Health: Unraveling the Microbiota Connection

Prof. Bo Yang; Dr. Nan Zhao; Prof. Catherine Stanton ; Prof. Michael Gänzle; Dr. Mengfan Ding

Submission Deadline: 31 Oct 2025

Published articles: 0

Topic: Gut Microbiome and Metabolic Diseases

Prof. Jie Yin; Dr. Jie Ma

Submission Deadline: 31 Oct 2025

Published articles: 0

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Themed Collections
bifidobacteria
gut microbiota
microbiome
probiotics
bacteriophage
phages
antibiotics
microbial
infant gut
microbial ecology
intestinal microbiome
host-microbe interactions
intestinal fungi
microbial ecosystems
metagenomics
microbial DNA sequencing
bifidobacterium
genomic
irritable bowel syndrome
Topic: Metabolomics and Proteomic Approaches Applied to Microbiomes
Topic: Lactic Acid Bacteria: Functional Characterization and Applications
Topic: Microbial Biomarkers for Immune Microenvironment in Chronic Diseases: Intervention and Prognosis
Volume 4, Issue 1 (in progress)
Volume 3, Issue 4
Volume 3, Issue 3
Volume 3, Issue 2
Volume 3, Issue 1
Volume 2, Issue 4
Volume 2, Issue 3
Volume 2, Issue 2
Volume 2, Issue 1
Volume 1, Issue 4
Volume 1, Issue 3
Volume 1, Issue 2
Volume 1, Issue 1
Articles Collection
Special Issue: Akkermansia muciniphila and Its Health Benefits: From Associations to Causality
A Special Interview with Prof. Gregor Reid - Fellow of the Royal Society of Canada and 2024 Highly Cited Researcher
On January 25, 2025, the Editorial Office of Microbiome Research Reports (MRR) was delighted to have a special interview with Prof. Gregor Reid, a Distinguished Professor Emeritus at Western University, Fellow of the Royal Society of Ca
Welcome Prof. Gong Cheng from Tsinghua University in China to join the Editorial Board of Microbiome Research Reports
We are delighted to announce that Prof. Gong Cheng from School of Basic Medical Sciences, Tsinghua University, has officially joined the Editorial Board of Microbiome Research Reports (MRR), effective January 2025, for a two-year renewable term.
Congratulations! Thirteen Editorial Board Members of Microbiome Research Reports Have Been Listed as the "Highly Cited Researchers 2024" by Clarivate Analytics
On November 19, 2024, Clarivate Analytics revealed the list of "Highly Cited Researchers 2024",recognizing scientists who have made significant and broad contributions to their fields, as reflected in their research impact.
Latest Online: Gut Microbiome and Metabolic Diseases
Explore the roles of gut microbiota in metabolic diseases and identify microorganisms for their prevention and treatment through microbial interventions.
Call for Applications - Shape the future of microbiome research!
We are committed to fostering the next generation of academic leaders by offering early-career researchers the opportunity to gain valuable editorial experience while contributing to the advancement of microbiome science

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls

Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components

Microbial interactions and the homeostasis of the gut microbiome: the role of Bifidobacterium

MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes

Folate-producing bifidobacteria: metabolism, genetics, and relevance

In vitro human gut microbiota fermentation models: opportunities, challenges, and pitfalls
Julia Isenring, ... Christophe Lacroix
Open Access | Review | 16 Jan 2023
Views: | Downloads:
Download PDF
Mode of action of Akkermansia muciniphila in the intestinal dialogue: role of extracellular proteins, metabolites and cell envelope components
Anneleen Segers, Willem M. de VosWillem M. de Vos
Open Access | Review | 12 Mar 2023
Views: | Downloads:
Download PDF
MEGAnnotator2: a pipeline for the assembly and annotation of microbial genomes
Gabriele Andrea LugliGabriele Andrea Lugli, ... Marco Ventura
Open Access | Original Article | 29 Apr 2023
Views: | Downloads:
Download PDF

Topic: Fermented Foods and Gut Health: Unraveling the Microbiota Connection

Prof. Bo Yang; Dr. Nan Zhao; Prof. Catherine Stanton ; Prof. Michael Gänzle; Dr. Mengfan Ding

Submission Deadline: 31 Oct 2025

Published articles: 0

Topic: Gut Microbiome and Metabolic Diseases

Prof. Jie Yin; Dr. Jie Ma

Submission Deadline: 31 Oct 2025

Published articles: 0

Microbiome Research Reports
ISSN 2771-5965 (Online)
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All published articles are preserved here permanently:

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